CDS

Accession Number TCMCG017C31184
gbkey CDS
Protein Id OMO60187.1
Location join(55629..55752,56820..58963)
GeneID InterPro:IPR000477
Organism Corchorus olitorius
locus_tag COLO4_33914

Protein

Length 755aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01021944.1
Definition reverse transcriptase [Corchorus olitorius]
Locus_tag COLO4_33914

EGGNOG-MAPPER Annotation

COG_category A
Description intron homing
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000373        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000959        [VIEW IN EMBL-EBI]
GO:0000963        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003964        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006278        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006314        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0034061        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090615        [VIEW IN EMBL-EBI]
GO:0140053        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGCTTCTTCGACGCATCTAGACGCTGCTGCGCCACTGGTGACTGTGGTGCCTTCCTCATCTGCAATGGCCTCGGTGGTGCGTGAGAGACTTGAACCAGATGTGTCCGGTGGGTTTGCAATTCTCAACCATTACTCTCATGGAAGTTTCTCCAATCTCCTCCGCCACGTCGTCGCTTCTCCTTCTGTTCTTCTCACCGCCTGCCAAAACCTTTCCAACTCTCCCCATTCAGCTACAGCATCGCTCCTTCACTCTGTTTCCAACCACTTCTCTGTTGACCAAATGGGTCTTGAAATCTCCCAGAACAAGTTCGACATTTCCTCTTGCTGTGTCAAAATGGCCTCGCCCGGTGCTTCAGGTGAGCCTTTGATTTTACCAAACTTGAAACTCAAAGTTTTGATTGAAGCTATTAGGATGGTACTTGAAATTGTTTATGATGAAAGGTTTGTGACGTTTTCTTATGGCGGGCGCGTTGGAATGGGCAGACATACTGCCATTAGGTACTTAAAGAACAGTGTAACCAACCCAAGCTGGTGGTTTAATGTTTCTTTTTGTCCTAGCAAGTTTGAGGAGTTTAATGTTGATAAGTTGTGCTTGTTTCTTGGTGAGAAAATTAAGGATGCTATGCTGATTGATGTGATAAAGAAGTTGTTTGAATGTCAAGTGGTTAGGATTGAATTGGGTGGGTGTTATTTAGGGAGAGGTTTTCCTCAAGAAAGTGGATTGTGTTCTATTTTGATTAATGTTTATTTTGATGGGTTTGATAGAGAAGTTCAAGAACTGAGGCTTCAAATGAATAGGAAGAATCCTAAAATTGAGTTGAATGAGCTTGGTTTGAATAACTCAAATGTTTTCTATAAGCCGGTGAAAATGTATGCAGTTAGGTACTTGGATGAGATATTGGTAATCACGTCTGGCTCAAAAATGTTAATAAAGGAGTTAAGGGACCAAGTTTTGGATTTTTTGGAAGGGAATTTGGGGTTGAAGGTGGATAGAGTGAAAACGGCTATACATAGTGCAGTGTCAGAGAAGATTTTTTTTTTGGGGATAGAATTGCAGGCTGTTCCTCCTTCTGTTTTGCATCCCCCTACGTCAGAGAAGGCAATTAGGGCCAGGAAGAAGTATCTTAGACAGAAGGAAGTTAGAGCTTTAGAATTGAGGAAAGCTCGGGAGAGAAATAGGAGAAAATTGGGTTTGAAGATATGGAGTCATGTCTTTAAGAAGTTGAAGCAGAGTAACAATGGGTTTAAATTTGAATTTCAAATTGAGAATGAAGTCAGAGAAATCTTTAGGACTTGGGGGGATGAAGTAGTCCAAGAGTTCTTTGGGTCACTGGAAGAACGATGGAACTGGCATCGGCTGCTCTCTAGAGGTGATTTTTTATCTTTAAGACATATTAGAGATCAGTTGCCGCAAGATCTTGTTGATGCTTATGACAAATTCCAAGAACAAGTCGACATGCATTTGACACCTTTCAAAGCTAGAAAGGCATTGGAAGAAGAAGAAAGGAGAGTAATAGAAGAAGAGGAACAGAAATATGCTGAGCACACGGTGGAGGATCTGACCAAGCTGTGTATGAAAGTTTCTGCGCCTATAGAACTTGTAAGGAAGGCTGTTAGAATGGCAGGCTTTACGAATAACATGGGTCGTCCCAGGCCAATCAGCCTACTCTTTGCATTGGAAGATACTGACATTATTAAGTGGTATGCTGGTATTGGGAGAAGATGGCTTGATTTCTTCTGCTGTTGTCACAACTTCAAAATGGTGAAAACAGTCGTTTCTTATCACTTAAGATTCTCTTGTATTTTAACATTGGCACATAAGCATGAATCCACCAAATGTGAAGCAATTAAACATTACAGTAAAGATTTGAAAGTGTCTGATATGAATGGAAATGAAGAAGTTTACTTCCCAACAGAGAGGAATGTTAAGATGATGGGTGATAAAAATCTTTCAGACCCAAAACCTGTGGATGGGGCTCTATCTTTGGCTTTGATCAGATTGGCTTCTGATGAGCCATCACATTCTTGTGTTGCGCATTTCTGTGACAGGATTGATACAATCATGTATAGAGTTAGGTTACTGCAAAACAATCTAAATCTGAATCCCCTGGATGAAGCACAGTGGGTCAAGGGTATGGGTGTTATTCATGAAAGTTTGAATCAGAAATGCGTGCCACTCTGTCCTGATCACATAAAAGATTTATACATGGGTAATATCAACCTACAGGACATTGACTGCACGTCATTTGTGGAAGTTGACTAA
Protein:  
MAASSTHLDAAAPLVTVVPSSSAMASVVRERLEPDVSGGFAILNHYSHGSFSNLLRHVVASPSVLLTACQNLSNSPHSATASLLHSVSNHFSVDQMGLEISQNKFDISSCCVKMASPGASGEPLILPNLKLKVLIEAIRMVLEIVYDERFVTFSYGGRVGMGRHTAIRYLKNSVTNPSWWFNVSFCPSKFEEFNVDKLCLFLGEKIKDAMLIDVIKKLFECQVVRIELGGCYLGRGFPQESGLCSILINVYFDGFDREVQELRLQMNRKNPKIELNELGLNNSNVFYKPVKMYAVRYLDEILVITSGSKMLIKELRDQVLDFLEGNLGLKVDRVKTAIHSAVSEKIFFLGIELQAVPPSVLHPPTSEKAIRARKKYLRQKEVRALELRKARERNRRKLGLKIWSHVFKKLKQSNNGFKFEFQIENEVREIFRTWGDEVVQEFFGSLEERWNWHRLLSRGDFLSLRHIRDQLPQDLVDAYDKFQEQVDMHLTPFKARKALEEEERRVIEEEEQKYAEHTVEDLTKLCMKVSAPIELVRKAVRMAGFTNNMGRPRPISLLFALEDTDIIKWYAGIGRRWLDFFCCCHNFKMVKTVVSYHLRFSCILTLAHKHESTKCEAIKHYSKDLKVSDMNGNEEVYFPTERNVKMMGDKNLSDPKPVDGALSLALIRLASDEPSHSCVAHFCDRIDTIMYRVRLLQNNLNLNPLDEAQWVKGMGVIHESLNQKCVPLCPDHIKDLYMGNINLQDIDCTSFVEVD